Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 KRT18P46-201ENST00000435568 1279 ntBASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 KRT18P62-201ENST00000446618 1287 ntBASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 AC018529.2-202ENST00000611482 3087 ntBASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 AC007952.5-201ENST00000572818 1486 ntBASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 BPIFB5P-201ENST00000457066 1099 ntBASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CYP4F36P-201ENST00000589193 186 ntBASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCDC187A0A096LP49 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AL122018.1-201ENST00000446607 2310 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC103592.1-201ENST00000394513 664 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms