Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AL157996.1-201ENST00000624684 2299 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC104581.4-201ENST00000623126 3052 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AC092580.1-201ENST00000433998 658 ntBASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AL022334.2-201ENST00000610000 484 ntBASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 TBC1D3J-201ENST00000620719 1426 ntBASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL4A3BPQ9Y5P4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 AC089987.1-201ENST00000551654 2209 ntBASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 CEP164P1-201ENST00000455142 418 ntBASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 KRT18P15-201ENST00000458108 1291 ntBASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 RN7SL530P-201ENST00000485097 298 ntBASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 AC008723.1-201ENST00000506922 207 ntBASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.91■□□□□ 0.14
COL4A3BPQ9Y5P4 AC026803.1-201ENST00000569130 274 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms