Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 PSMD4P1-201ENST00000433951 1109 ntBASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AL136982.5-201ENST00000605222 294 ntBASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AC011471.3-201ENST00000623576 402 ntBASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 LINC00431-202ENST00000636375 159 ntBASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 Z98885.3-201ENST00000624882 1757 ntBASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 AC114501.1-201ENST00000445949 172 ntBASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 AC079250.1-201ENST00000456046 531 ntBASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 AL157792.1-201ENST00000488281 530 ntBASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SYNPO2Q9UMS6 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 SNORA50C-201ENST00000408535 133 ntBASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 AC108734.2-201ENST00000420887 1069 ntBASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 AL356740.1-201ENST00000602192 1297 ntBASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 MIR8071-1-201ENST00000616769 65 ntBASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 MIR8071-2-201ENST00000616772 65 ntBASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPO2Q9UMS6 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms