Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF7Q9UBF6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF7Q9UBF6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.02□□□□□ -0.49
RNF7Q9UBF6 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
RNF7Q9UBF6 RPL13AP3-202ENST00000494676 1473 ntBASIC12.02□□□□□ -0.49
RNF7Q9UBF6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 AC015909.3-201ENST00000572855 1794 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 ELK2AP-201ENST00000392510 1007 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 AL353637.1-201ENST00000451571 732 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 GOLGA2P8-201ENST00000505201 779 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 KRT8P1-201ENST00000557533 1207 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 LINC01783-202ENST00000614408 828 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 BAP1-211ENST00000615113 489 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 MIR6769A-201ENST00000617340 73 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 BX284668.2-205ENST00000619677 828 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 BRD7P5-201ENST00000299197 1822 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 AC008132.1-202ENST00000342005 1389 ntBASIC12.01□□□□□ -0.49
RNF7Q9UBF6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF7Q9UBF6 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RNF7Q9UBF6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RNF7Q9UBF6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
RNF7Q9UBF6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12□□□□□ -0.49
RNF7Q9UBF6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RNF7Q9UBF6 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RNF7Q9UBF6 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 NME6-203ENST00000415644 849 ntTSL 2 BASIC12□□□□□ -0.49
RNF7Q9UBF6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12□□□□□ -0.49
RNF7Q9UBF6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 AL133466.1-201ENST00000447582 150 ntBASIC12□□□□□ -0.49
RNF7Q9UBF6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12□□□□□ -0.49
RNF7Q9UBF6 AC012618.1-201ENST00000461223 412 ntBASIC12□□□□□ -0.49
RNF7Q9UBF6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF7Q9UBF6 AC024681.1-201ENST00000521917 487 ntBASIC12□□□□□ -0.49
RNF7Q9UBF6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12□□□□□ -0.49
RNF7Q9UBF6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12□□□□□ -0.49
RNF7Q9UBF6 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12□□□□□ -0.49
RNF7Q9UBF6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms