Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 RPL13AP3-202ENST00000494676 1473 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 TSPY25P-201ENST00000429463 745 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 BX284668.4-201ENST00000453917 508 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 GOLGA2P8-201ENST00000505201 779 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 MARK2P5-201ENST00000507649 634 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 SCARNA20.5-201ENST00000516991 142 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 AC020914.3-201ENST00000594712 304 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.91□□□□□ -0.34
ATG4DQ86TL0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATG4DQ86TL0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AC016700.1-201ENST00000429424 312 ntBASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AC011742.3-201ENST00000439053 820 ntBASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 AC138028.6-201ENST00000616106 1482 ntBASIC12.9□□□□□ -0.34
ATG4DQ86TL0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATG4DQ86TL0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.9□□□□□ -0.35
ATG4DQ86TL0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ATG4DQ86TL0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.89□□□□□ -0.35
ATG4DQ86TL0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.89□□□□□ -0.35
ATG4DQ86TL0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATG4DQ86TL0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATG4DQ86TL0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.89□□□□□ -0.35
ATG4DQ86TL0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 329.9 ms