Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HERC4Q5GLZ8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HERC4Q5GLZ8 AC018629.1-201ENST00000623381 1736 ntBASIC15.97■□□□□ 0.15
HERC4Q5GLZ8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 AC010327.5-201ENST00000586923 3061 ntBASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 AC011742.3-201ENST00000439053 820 ntBASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 OR2R1P-201ENST00000441404 914 ntBASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 AC098935.1-201ENST00000446057 611 ntBASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 AC090164.2-201ENST00000611487 516 ntBASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 AC068587.8-201ENST00000641239 219 ntBASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HERC4Q5GLZ8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HERC4Q5GLZ8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 DPM3-202ENST00000368399 517 ntBASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 RPL13AP19-201ENST00000434320 584 ntBASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 XBP1P1-201ENST00000436573 652 ntBASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 KRT18P66-201ENST00000452970 1269 ntBASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AC005740.2-201ENST00000511085 419 ntBASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AC140658.4-201ENST00000561990 352 ntBASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HERC4Q5GLZ8 CCT8L1P-201ENST00000465400 1674 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms