Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB3BP20337 TSEN15P1-201ENST00000423257 515 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 AL442647.2-201ENST00000429864 857 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 AC245100.3-201ENST00000441281 285 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 AC067863.1-201ENST00000494933 530 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 SNHG9-202ENST00000564014 471 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 AC104794.3-201ENST00000566840 1248 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB3BP20337 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.55□□□□□ -0.4
RAB3BP20337 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 AC011700.1-201ENST00000610409 2627 ntBASIC12.55□□□□□ -0.4
RAB3BP20337 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
RAB3BP20337 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 GHET1-201ENST00000627071 1906 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RAB3BP20337 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB3BP20337 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB3BP20337 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RAB3BP20337 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 PCDHB19P-202ENST00000625133 2914 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 UPF3AP3-201ENST00000420996 769 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB3BP20337 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 FTLP10-202ENST00000505798 471 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 DOC2GP-202ENST00000514950 1163 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.54□□□□□ -0.4
RAB3BP20337 IGHV3-42-201ENST00000520410 361 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB3BP20337 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB3BP20337 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 AC138466.3-201ENST00000619983 221 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 AC008761.3-201ENST00000624803 892 ntBASIC12.54□□□□□ -0.4
RAB3BP20337 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB3BP20337 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB3BP20337 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RAB3BP20337 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB3BP20337 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms