Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PRKCAP17252 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.31□□□□□ -0.28
PRKCAP17252 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.31□□□□□ -0.28
PRKCAP17252 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.31□□□□□ -0.28
PRKCAP17252 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.31□□□□□ -0.28
PRKCAP17252 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.31□□□□□ -0.28
PRKCAP17252 MTX1P1-201ENST00000440904 838 ntBASIC13.31□□□□□ -0.28
PRKCAP17252 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.31□□□□□ -0.28
PRKCAP17252 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.31□□□□□ -0.28
PRKCAP17252 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.31□□□□□ -0.28
PRKCAP17252 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.31□□□□□ -0.28
PRKCAP17252 SORD2P-201ENST00000558556 1069 ntBASIC13.31□□□□□ -0.28
PRKCAP17252 MIR4783-201ENST00000580343 82 ntBASIC13.31□□□□□ -0.28
PRKCAP17252 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.31□□□□□ -0.28
PRKCAP17252 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRKCAP17252 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PRKCAP17252 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PRKCAP17252 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PRKCAP17252 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
PRKCAP17252 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRKCAP17252 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.31□□□□□ -0.28
PRKCAP17252 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 RN7SL832P-201ENST00000607781 1756 ntBASIC13.3□□□□□ -0.28
PRKCAP17252 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 AC020658.7-201ENST00000624274 2442 ntBASIC13.3□□□□□ -0.28
PRKCAP17252 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PRKCAP17252 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 AL354877.1-201ENST00000424412 413 ntBASIC13.3□□□□□ -0.28
PRKCAP17252 HSPB1P2-201ENST00000448722 546 ntBASIC13.3□□□□□ -0.28
PRKCAP17252 RPL13AP20-201ENST00000459725 609 ntBASIC13.3□□□□□ -0.28
PRKCAP17252 RPSAP36-202ENST00000494591 1261 ntBASIC13.3□□□□□ -0.28
PRKCAP17252 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.3□□□□□ -0.28
PRKCAP17252 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.3□□□□□ -0.28
PRKCAP17252 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
PRKCAP17252 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.3□□□□□ -0.28
PRKCAP17252 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.3□□□□□ -0.28
PRKCAP17252 AL008721.1-201ENST00000609964 604 ntBASIC13.3□□□□□ -0.28
PRKCAP17252 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.3□□□□□ -0.28
PRKCAP17252 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.3□□□□□ -0.28
PRKCAP17252 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PRKCAP17252 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PRKCAP17252 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.3□□□□□ -0.28
PRKCAP17252 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.3□□□□□ -0.28
PRKCAP17252 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRKCAP17252 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PRKCAP17252 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.29□□□□□ -0.28
PRKCAP17252 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PRKCAP17252 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PRKCAP17252 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
PRKCAP17252 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PRKCAP17252 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PRKCAP17252 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.29□□□□□ -0.28
PRKCAP17252 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PRKCAP17252 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms