Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.9□□□□□ -0.02
RB1P06400 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.9□□□□□ -0.02
RB1P06400 PTPN20CP-201ENST00000614090 920 ntBASIC14.9□□□□□ -0.02
RB1P06400 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.9□□□□□ -0.02
RB1P06400 AC139713.2-207ENST00000641556 1292 ntBASIC14.9□□□□□ -0.02
RB1P06400 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.9□□□□□ -0.02
RB1P06400 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RB1P06400 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.9□□□□□ -0.02
RB1P06400 AC092115.1-201ENST00000566277 1402 ntBASIC14.9□□□□□ -0.02
RB1P06400 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RB1P06400 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.9□□□□□ -0.02
RB1P06400 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 AP002414.2-201ENST00000591780 3365 ntBASIC14.9□□□□□ -0.02
RB1P06400 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.9□□□□□ -0.02
RB1P06400 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RB1P06400 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.89□□□□□ -0.03
RB1P06400 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RB1P06400 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 PGAM1P11-201ENST00000416729 680 ntBASIC14.89□□□□□ -0.03
RB1P06400 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.89□□□□□ -0.03
RB1P06400 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.89□□□□□ -0.03
RB1P06400 AC092896.1-201ENST00000465850 380 ntBASIC14.89□□□□□ -0.03
RB1P06400 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
RB1P06400 BCL2L12P1-201ENST00000508390 733 ntBASIC14.89□□□□□ -0.03
RB1P06400 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.89□□□□□ -0.03
RB1P06400 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.89□□□□□ -0.03
RB1P06400 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.89□□□□□ -0.03
RB1P06400 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.89□□□□□ -0.03
RB1P06400 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.89□□□□□ -0.03
RB1P06400 FBXO36P1-201ENST00000579006 471 ntBASIC14.89□□□□□ -0.03
RB1P06400 CSTP2-201ENST00000610599 398 ntBASIC14.89□□□□□ -0.03
RB1P06400 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.89□□□□□ -0.03
RB1P06400 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RB1P06400 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 AC103702.1-201ENST00000548801 2630 ntBASIC14.89□□□□□ -0.03
RB1P06400 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.89□□□□□ -0.03
RB1P06400 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 AC018529.2-202ENST00000611482 3087 ntBASIC14.89□□□□□ -0.03
RB1P06400 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RB1P06400 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RB1P06400 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 AC232323.1-201ENST00000540724 2099 ntBASIC14.88□□□□□ -0.03
RB1P06400 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.88□□□□□ -0.03
RB1P06400 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.88□□□□□ -0.03
RB1P06400 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 BRI3P1-201ENST00000440440 378 ntBASIC14.88□□□□□ -0.03
RB1P06400 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.88□□□□□ -0.03
RB1P06400 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.88□□□□□ -0.03
RB1P06400 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.88□□□□□ -0.03
RB1P06400 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 AL031673.1-201ENST00000611460 466 ntBASIC14.88□□□□□ -0.03
RB1P06400 AC011462.4-201ENST00000616866 449 ntBASIC14.88□□□□□ -0.03
RB1P06400 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.88□□□□□ -0.03
RB1P06400 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms