Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 MARK2P16-201ENST00000605714 1723 ntBASIC12.56□□□□□ -0.4
NPIPB4C9JG80 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL591122.2-201ENST00000624125 1853 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AC136604.1-202ENST00000425471 771 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 DUX4L50-201ENST00000455245 715 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL356740.1-201ENST00000602192 1297 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL645939.5-201ENST00000606834 243 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AC026740.1-201ENST00000607068 791 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL033527.4-201ENST00000641026 673 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL805961.1-203ENST00000641078 1258 ntBASIC12.55□□□□□ -0.4
NPIPB4C9JG80 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB4C9JG80 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 AC108024.1-201ENST00000626286 1721 ntBASIC12.54□□□□□ -0.4
NPIPB4C9JG80 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms