Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
IFT52Q9Y366 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
IFT52Q9Y366 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFT52Q9Y366 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFT52Q9Y366 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
IFT52Q9Y366 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.46□□□□□ -0.26
IFT52Q9Y366 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFT52Q9Y366 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFT52Q9Y366 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
IFT52Q9Y366 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.46□□□□□ -0.26
IFT52Q9Y366 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFT52Q9Y366 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
IFT52Q9Y366 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
IFT52Q9Y366 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AHCYP2-201ENST00000430630 1300 ntBASIC13.45□□□□□ -0.26
IFT52Q9Y366 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AC132938.2-201ENST00000579188 680 ntBASIC13.45□□□□□ -0.26
IFT52Q9Y366 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AL136301.1-201ENST00000615830 422 ntBASIC13.45□□□□□ -0.26
IFT52Q9Y366 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AL591163.1-201ENST00000641757 987 ntBASIC13.45□□□□□ -0.26
IFT52Q9Y366 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AC134407.3-201ENST00000624035 2139 ntBASIC13.45□□□□□ -0.26
IFT52Q9Y366 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.45□□□□□ -0.26
IFT52Q9Y366 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFT52Q9Y366 AOC4P-203ENST00000566825 2289 ntBASIC13.44□□□□□ -0.26
IFT52Q9Y366 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 SHC1P1-201ENST00000425230 1745 ntBASIC13.44□□□□□ -0.26
IFT52Q9Y366 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms