Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 SLC25A24P2-201ENST00000415059 510 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 ATP6V0CP2-201ENST00000469409 207 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 AL391280.1-201ENST00000506969 1062 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 ACTG1P17-201ENST00000558391 1119 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 MIR497HG-202ENST00000572453 3838 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 AC073413.1-201ENST00000603927 732 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 ZACNP1-201ENST00000612259 710 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 AL603764.1-201ENST00000636452 321 ntBASIC9.58□□□□□ -0.88
SCXQ7RTU7 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SCXQ7RTU7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SCXQ7RTU7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 OR2I1P-208ENST00000641137 4948 ntBASIC9.57□□□□□ -0.88
SCXQ7RTU7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AC018735.1-201ENST00000437208 1502 ntBASIC9.57□□□□□ -0.88
SCXQ7RTU7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms