Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 KLF2P2-201ENST00000416807 1039 ntBASIC13.04□□□□□ -0.32
RBM48Q5RL73 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 ZNF890P-202ENST00000530367 1156 ntBASIC13.04□□□□□ -0.32
RBM48Q5RL73 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 AC036164.1-201ENST00000570544 333 ntBASIC13.04□□□□□ -0.32
RBM48Q5RL73 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 AL662799.1-202ENST00000614205 422 ntBASIC13.04□□□□□ -0.32
RBM48Q5RL73 SPDYE12P-201ENST00000618416 771 ntBASIC13.04□□□□□ -0.32
RBM48Q5RL73 AC007431.3-201ENST00000623221 587 ntBASIC13.04□□□□□ -0.32
RBM48Q5RL73 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.04□□□□□ -0.32
RBM48Q5RL73 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RBM48Q5RL73 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 HNRNPMP1-201ENST00000560685 1768 ntBASIC13.03□□□□□ -0.32
RBM48Q5RL73 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 SPDYE22P-201ENST00000582158 798 ntBASIC13.03□□□□□ -0.32
RBM48Q5RL73 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.03□□□□□ -0.32
RBM48Q5RL73 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RBM48Q5RL73 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.02□□□□□ -0.32
RBM48Q5RL73 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RBM48Q5RL73 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.02□□□□□ -0.32
RBM48Q5RL73 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RBM48Q5RL73 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms