Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.06■□□□□ 0.16
CCNA1P78396 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CCNA1P78396 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.06■□□□□ 0.16
CCNA1P78396 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCNA1P78396 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCNA1P78396 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCNA1P78396 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.06■□□□□ 0.16
CCNA1P78396 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCNA1P78396 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNA1P78396 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.05■□□□□ 0.16
CCNA1P78396 RN7SL832P-201ENST00000607781 1756 ntBASIC16.05■□□□□ 0.16
CCNA1P78396 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCNA1P78396 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCNA1P78396 FKBP4P8-201ENST00000610931 1369 ntBASIC16.05■□□□□ 0.16
CCNA1P78396 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.05■□□□□ 0.16
CCNA1P78396 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.05■□□□□ 0.16
CCNA1P78396 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.05■□□□□ 0.16
CCNA1P78396 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.05■□□□□ 0.16
CCNA1P78396 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.05■□□□□ 0.16
CCNA1P78396 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 RN7SL556P-201ENST00000582856 298 ntBASIC16.05■□□□□ 0.16
CCNA1P78396 TYMSP2-201ENST00000589501 424 ntBASIC16.05■□□□□ 0.16
CCNA1P78396 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.05■□□□□ 0.16
CCNA1P78396 AC018695.6-201ENST00000614011 534 ntBASIC16.05■□□□□ 0.16
CCNA1P78396 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.05■□□□□ 0.16
CCNA1P78396 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.05■□□□□ 0.16
CCNA1P78396 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.05■□□□□ 0.16
CCNA1P78396 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CCNA1P78396 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNA1P78396 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNA1P78396 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNA1P78396 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCNA1P78396 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNA1P78396 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNA1P78396 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CCNA1P78396 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 MIR1307-201ENST00000408840 149 ntBASIC16.04■□□□□ 0.16
CCNA1P78396 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNA1P78396 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNA1P78396 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNA1P78396 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms