Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC10.14□□□□□ -0.79
RPL39P62891 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.14□□□□□ -0.79
RPL39P62891 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 AC004449.1-201ENST00000564240 433 ntBASIC10.14□□□□□ -0.79
RPL39P62891 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.14□□□□□ -0.79
RPL39P62891 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.14□□□□□ -0.79
RPL39P62891 AC104506.1-201ENST00000609247 429 ntBASIC10.14□□□□□ -0.79
RPL39P62891 BX088702.1-201ENST00000610784 235 ntBASIC10.14□□□□□ -0.79
RPL39P62891 AC004790.1-201ENST00000612686 536 ntBASIC10.14□□□□□ -0.79
RPL39P62891 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 AC024075.2-201ENST00000598112 1473 ntBASIC10.14□□□□□ -0.79
RPL39P62891 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
RPL39P62891 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 AC060814.4-201ENST00000594169 2163 ntBASIC10.14□□□□□ -0.79
RPL39P62891 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 KRT8P28-201ENST00000433288 1390 ntBASIC10.14□□□□□ -0.79
RPL39P62891 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.13□□□□□ -0.79
RPL39P62891 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 CLUHP2-201ENST00000426660 1303 ntBASIC10.13□□□□□ -0.79
RPL39P62891 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 AC115284.2-201ENST00000624646 2054 ntBASIC10.13□□□□□ -0.79
RPL39P62891 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC10.13□□□□□ -0.79
RPL39P62891 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.13□□□□□ -0.79
RPL39P62891 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 AMT-221ENST00000538581 2038 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 SOCS2P1-201ENST00000417727 557 ntBASIC10.13□□□□□ -0.79
RPL39P62891 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.13□□□□□ -0.79
RPL39P62891 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.13□□□□□ -0.79
RPL39P62891 AK2P2-201ENST00000439142 405 ntBASIC10.13□□□□□ -0.79
RPL39P62891 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.13□□□□□ -0.79
RPL39P62891 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 AC025678.2-201ENST00000562061 970 ntBASIC10.13□□□□□ -0.79
RPL39P62891 AC124283.3-201ENST00000570869 594 ntBASIC10.13□□□□□ -0.79
RPL39P62891 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.13□□□□□ -0.79
RPL39P62891 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC10.13□□□□□ -0.79
RPL39P62891 AP005019.2-201ENST00000615104 511 ntBASIC10.13□□□□□ -0.79
RPL39P62891 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 AC027369.3-201ENST00000530465 3707 ntBASIC10.13□□□□□ -0.79
RPL39P62891 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.13□□□□□ -0.79
RPL39P62891 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.13□□□□□ -0.79
RPL39P62891 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 AP003969.2-201ENST00000623739 2275 ntBASIC10.13□□□□□ -0.79
RPL39P62891 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RPL39P62891 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms