Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 AL365181.3-201ENST00000605886 3222 ntBASIC14.87□□□□□ -0.03
CDH6P55285 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH6P55285 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH6P55285 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDH6P55285 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDH6P55285 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDH6P55285 AC092580.1-201ENST00000433998 658 ntBASIC14.87□□□□□ -0.03
CDH6P55285 POM121L10P-201ENST00000436994 1285 ntBASIC14.87□□□□□ -0.03
CDH6P55285 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH6P55285 AL591846.1-201ENST00000451736 433 ntBASIC14.87□□□□□ -0.03
CDH6P55285 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.87□□□□□ -0.03
CDH6P55285 KRT18P15-201ENST00000458108 1291 ntBASIC14.87□□□□□ -0.03
CDH6P55285 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH6P55285 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH6P55285 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 AC104982.3-201ENST00000581995 514 ntBASIC14.87□□□□□ -0.03
CDH6P55285 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH6P55285 AC005695.3-201ENST00000614522 232 ntBASIC14.87□□□□□ -0.03
CDH6P55285 AC022748.3-201ENST00000621828 275 ntBASIC14.87□□□□□ -0.03
CDH6P55285 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 AC007952.5-201ENST00000572818 1486 ntBASIC14.87□□□□□ -0.03
CDH6P55285 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH6P55285 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH6P55285 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH6P55285 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH6P55285 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 AP002353.1-201ENST00000528257 1599 ntBASIC14.86□□□□□ -0.03
CDH6P55285 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH6P55285 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH6P55285 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH6P55285 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH6P55285 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH6P55285 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH6P55285 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH6P55285 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH6P55285 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH6P55285 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH6P55285 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.86□□□□□ -0.03
CDH6P55285 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH6P55285 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH6P55285 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH6P55285 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.86□□□□□ -0.03
CDH6P55285 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms