Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNA3P52797 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 AC117489.1-201ENST00000625169 3217 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 LINC01230-201ENST00000625222 3017 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 FAM45BP-202ENST00000592932 1624 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNA3P52797 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNA3P52797 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
EFNA3P52797 AL512430.1-201ENST00000392575 860 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNA3P52797 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNA3P52797 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 AC005740.1-201ENST00000515639 522 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNA3P52797 AL512310.5-201ENST00000551999 515 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNA3P52797 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 AC073352.2-201ENST00000609385 439 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 MIR6842-201ENST00000612539 65 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
EFNA3P52797 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNA3P52797 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNA3P52797 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 LINC02486-201ENST00000604157 3000 ntBASIC13.32□□□□□ -0.28
EFNA3P52797 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
EFNA3P52797 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA3P52797 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNA3P52797 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 AC026748.1-201ENST00000624349 3251 ntBASIC13.31□□□□□ -0.28
EFNA3P52797 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
EFNA3P52797 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 FTLP1-201ENST00000449155 526 ntBASIC13.31□□□□□ -0.28
EFNA3P52797 TMEM198B-204ENST00000484016 896 ntBASIC13.31□□□□□ -0.28
EFNA3P52797 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.31□□□□□ -0.28
EFNA3P52797 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNA3P52797 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
EFNA3P52797 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNA3P52797 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
EFNA3P52797 AL805961.1-201ENST00000642026 753 ntBASIC13.31□□□□□ -0.28
EFNA3P52797 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
EFNA3P52797 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms