Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 AL645933.1-201ENST00000440087 609 ntBASIC14.1□□□□□ -0.15
CDH3P22223 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH3P22223 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH3P22223 HLA-J-204ENST00000495278 958 ntBASIC14.1□□□□□ -0.15
CDH3P22223 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 MARK2P5-201ENST00000507649 634 ntBASIC14.1□□□□□ -0.15
CDH3P22223 SCARNA21-201ENST00000517026 139 ntBASIC14.1□□□□□ -0.15
CDH3P22223 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 AL160314.3-201ENST00000556041 767 ntBASIC14.1□□□□□ -0.15
CDH3P22223 AC103988.2-201ENST00000561804 725 ntBASIC14.1□□□□□ -0.15
CDH3P22223 AC026740.1-201ENST00000607068 791 ntBASIC14.1□□□□□ -0.15
CDH3P22223 AP000346.4-201ENST00000614827 381 ntBASIC14.1□□□□□ -0.15
CDH3P22223 AL805961.1-203ENST00000641078 1258 ntBASIC14.1□□□□□ -0.15
CDH3P22223 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CDH3P22223 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CDH3P22223 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH3P22223 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CDH3P22223 CICP16-201ENST00000502609 2813 ntBASIC14.1□□□□□ -0.15
CDH3P22223 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 AL590440.2-201ENST00000641973 1595 ntBASIC14.09□□□□□ -0.15
CDH3P22223 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 AC009093.10-201ENST00000641956 1442 ntBASIC14.09□□□□□ -0.15
CDH3P22223 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDH3P22223 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 SLC25A24P2-201ENST00000415059 510 ntBASIC14.09□□□□□ -0.15
CDH3P22223 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 VDAC1P1-201ENST00000439229 848 ntBASIC14.09□□□□□ -0.15
CDH3P22223 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.09□□□□□ -0.15
CDH3P22223 RN7SL11P-201ENST00000471305 293 ntBASIC14.09□□□□□ -0.15
CDH3P22223 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CDH3P22223 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.09□□□□□ -0.15
CDH3P22223 AC100757.4-201ENST00000626934 759 ntBASIC14.09□□□□□ -0.15
CDH3P22223 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CDH3P22223 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 MST1P2-201ENST00000457982 2291 ntBASIC14.09□□□□□ -0.15
CDH3P22223 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.09□□□□□ -0.15
CDH3P22223 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
CDH3P22223 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms