Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.81□□□□□ -0.36
HLA-DOBP13765 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 DPM3-202ENST00000368399 517 ntBASIC12.81□□□□□ -0.36
HLA-DOBP13765 BRWD1P1-201ENST00000401091 371 ntBASIC12.81□□□□□ -0.36
HLA-DOBP13765 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AC104306.2-201ENST00000451877 341 ntBASIC12.81□□□□□ -0.36
HLA-DOBP13765 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 SNORD3B-2-202ENST00000571722 791 ntBASIC12.81□□□□□ -0.36
HLA-DOBP13765 RN7SL163P-201ENST00000583100 276 ntBASIC12.81□□□□□ -0.36
HLA-DOBP13765 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.81□□□□□ -0.36
HLA-DOBP13765 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.8□□□□□ -0.36
HLA-DOBP13765 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 SERPINA13P-202ENST00000478994 924 ntBASIC12.8□□□□□ -0.36
HLA-DOBP13765 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AL512310.5-201ENST00000551999 515 ntBASIC12.8□□□□□ -0.36
HLA-DOBP13765 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AC140658.4-201ENST00000561990 352 ntBASIC12.8□□□□□ -0.36
HLA-DOBP13765 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 AC005014.1-201ENST00000432006 2976 ntBASIC12.8□□□□□ -0.36
HLA-DOBP13765 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms