Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 KHSRPP1-201ENST00000427983 1768 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SFTPBP07988 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SFTPBP07988 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.52□□□□□ -0.4
SFTPBP07988 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.52□□□□□ -0.4
SFTPBP07988 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SFTPBP07988 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.52□□□□□ -0.4
SFTPBP07988 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SFTPBP07988 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SFTPBP07988 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.52□□□□□ -0.41
SFTPBP07988 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 FAM197Y7-201ENST00000432892 766 ntBASIC12.52□□□□□ -0.41
SFTPBP07988 CSF2RBP1-201ENST00000447905 391 ntBASIC12.52□□□□□ -0.41
SFTPBP07988 AL590640.2-201ENST00000457038 527 ntBASIC12.52□□□□□ -0.41
SFTPBP07988 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.52□□□□□ -0.41
SFTPBP07988 FTLP10-202ENST00000505798 471 ntBASIC12.52□□□□□ -0.41
SFTPBP07988 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.52□□□□□ -0.41
SFTPBP07988 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.52□□□□□ -0.41
SFTPBP07988 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.52□□□□□ -0.41
SFTPBP07988 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.52□□□□□ -0.41
SFTPBP07988 AP000812.2-201ENST00000538934 718 ntBASIC12.52□□□□□ -0.41
SFTPBP07988 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.52□□□□□ -0.41
SFTPBP07988 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 BX088702.1-201ENST00000610784 235 ntBASIC12.52□□□□□ -0.41
SFTPBP07988 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.52□□□□□ -0.41
SFTPBP07988 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
SFTPBP07988 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.52□□□□□ -0.41
SFTPBP07988 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
SFTPBP07988 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SFTPBP07988 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SFTPBP07988 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SFTPBP07988 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
SFTPBP07988 AC026954.1-201ENST00000429771 1293 ntBASIC12.51□□□□□ -0.41
SFTPBP07988 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.51□□□□□ -0.41
SFTPBP07988 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.51□□□□□ -0.41
SFTPBP07988 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms