Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
APOC3P02656 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
APOC3P02656 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
APOC3P02656 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
APOC3P02656 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC3P02656 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC3P02656 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.38□□□□□ -0.59
APOC3P02656 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC3P02656 AC138894.3-201ENST00000603787 634 ntBASIC11.38□□□□□ -0.59
APOC3P02656 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
APOC3P02656 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
APOC3P02656 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
APOC3P02656 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC3P02656 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC3P02656 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC3P02656 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC3P02656 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.38□□□□□ -0.59
APOC3P02656 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC3P02656 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 AL138709.1-201ENST00000614840 1693 ntBASIC11.37□□□□□ -0.59
APOC3P02656 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
APOC3P02656 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC3P02656 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 AC026271.2-201ENST00000428091 497 ntBASIC11.37□□□□□ -0.59
APOC3P02656 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC3P02656 FAM185BP-201ENST00000443595 716 ntBASIC11.37□□□□□ -0.59
APOC3P02656 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 KRT8P26-201ENST00000534154 1276 ntBASIC11.37□□□□□ -0.59
APOC3P02656 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.37□□□□□ -0.59
APOC3P02656 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC3P02656 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC3P02656 AL590483.3-201ENST00000623669 3580 ntBASIC11.37□□□□□ -0.59
APOC3P02656 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC3P02656 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 LINC01561-201ENST00000369071 2176 ntBASIC11.37□□□□□ -0.59
APOC3P02656 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC3P02656 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC3P02656 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
APOC3P02656 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms