Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.32□□□□□ -0.6
IFNA1P01562 TIMM8BP1-201ENST00000452384 211 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 AC022616.1-201ENST00000518688 554 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
IFNA1P01562 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.32□□□□□ -0.6
IFNA1P01562 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 AL049840.3-201ENST00000602669 611 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 LINC02084-201ENST00000606069 1096 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 AC007967.4-201ENST00000614700 386 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.32□□□□□ -0.6
IFNA1P01562 CR392039.2-201ENST00000623182 509 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
IFNA1P01562 AP000350.6-201ENST00000609510 5637 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 BX324167.2-201ENST00000623717 3316 ntBASIC11.32□□□□□ -0.6
IFNA1P01562 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
IFNA1P01562 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
IFNA1P01562 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
IFNA1P01562 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
IFNA1P01562 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 AL358781.1-202ENST00000321081 1360 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 AL645937.6-201ENST00000641122 3727 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 AL031284.1-201ENST00000419297 478 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.31□□□□□ -0.6
IFNA1P01562 AL592309.1-201ENST00000443127 649 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 FAM210CP-201ENST00000445714 574 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 GAPDHP40-201ENST00000505218 1006 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 KRT8P48-201ENST00000515599 1220 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms