Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.39□□□□□ -0.11
KDELR3O43731 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.39□□□□□ -0.11
KDELR3O43731 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.39□□□□□ -0.11
KDELR3O43731 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KDELR3O43731 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.39□□□□□ -0.11
KDELR3O43731 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KDELR3O43731 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.39□□□□□ -0.11
KDELR3O43731 PPP1R2P4-201ENST00000424051 595 ntBASIC14.39□□□□□ -0.11
KDELR3O43731 TMEM198B-204ENST00000484016 896 ntBASIC14.39□□□□□ -0.11
KDELR3O43731 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.39□□□□□ -0.11
KDELR3O43731 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.39□□□□□ -0.11
KDELR3O43731 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.39□□□□□ -0.11
KDELR3O43731 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.39□□□□□ -0.11
KDELR3O43731 RN7SL665P-201ENST00000578793 300 ntBASIC14.39□□□□□ -0.11
KDELR3O43731 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.39□□□□□ -0.11
KDELR3O43731 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KDELR3O43731 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KDELR3O43731 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
KDELR3O43731 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KDELR3O43731 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
KDELR3O43731 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 AL359881.3-201ENST00000602640 1721 ntBASIC14.38□□□□□ -0.11
KDELR3O43731 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.38□□□□□ -0.11
KDELR3O43731 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.38□□□□□ -0.11
KDELR3O43731 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.38□□□□□ -0.11
KDELR3O43731 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KDELR3O43731 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.38□□□□□ -0.11
KDELR3O43731 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.38□□□□□ -0.11
KDELR3O43731 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.38□□□□□ -0.11
KDELR3O43731 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.38□□□□□ -0.11
KDELR3O43731 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.38□□□□□ -0.11
KDELR3O43731 AC015967.2-201ENST00000624092 234 ntBASIC14.38□□□□□ -0.11
KDELR3O43731 AC006435.4-201ENST00000625037 234 ntBASIC14.38□□□□□ -0.11
KDELR3O43731 AL356737.1-201ENST00000634391 234 ntBASIC14.38□□□□□ -0.11
KDELR3O43731 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.38□□□□□ -0.11
KDELR3O43731 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KDELR3O43731 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KDELR3O43731 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.38□□□□□ -0.11
KDELR3O43731 KRT8P43-201ENST00000406052 1458 ntBASIC14.38□□□□□ -0.11
KDELR3O43731 AC004554.1-201ENST00000422830 1468 ntBASIC14.38□□□□□ -0.11
KDELR3O43731 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms