Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 ABHD17AP9-201ENST00000561925 548 ntBASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AL139339.2-201ENST00000608063 657 ntBASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 FKBP4P8-201ENST00000610931 1369 ntBASIC15.1■□□□□ 0.01
NPAS4Q8IUM7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 AC068760.1-201ENST00000493579 1953 ntBASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 MYO15B-237ENST00000642007 4893 ntBASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 DKKL1P1-201ENST00000400550 698 ntBASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 MIR1307-201ENST00000408840 149 ntBASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 EEF1DP2-201ENST00000433698 843 ntBASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 AC092862.1-201ENST00000541534 533 ntBASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 AP001527.2-201ENST00000614441 631 ntBASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS4Q8IUM7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NPAS4Q8IUM7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
NPAS4Q8IUM7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NPAS4Q8IUM7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms