Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CR383656.3-201ENST00000551315 183 ntBASIC15.89■□□□□ 0.13
TRIM50Q86XT4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 HERC2P11-201ENST00000562845 725 ntBASIC15.89■□□□□ 0.13
TRIM50Q86XT4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 AC100756.2-201ENST00000569537 736 ntBASIC15.89■□□□□ 0.13
TRIM50Q86XT4 NUDT4P2-201ENST00000578341 546 ntBASIC15.89■□□□□ 0.13
TRIM50Q86XT4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 SIGLEC22P-201ENST00000599104 714 ntBASIC15.89■□□□□ 0.13
TRIM50Q86XT4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 AC090505.1-201ENST00000430515 1834 ntBASIC15.89■□□□□ 0.13
TRIM50Q86XT4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRIM50Q86XT4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 PYY2-201ENST00000315776 282 ntBASIC15.88■□□□□ 0.13
TRIM50Q86XT4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AC005740.1-201ENST00000515639 522 ntBASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AP000911.2-201ENST00000534330 502 ntBASIC15.88■□□□□ 0.13
TRIM50Q86XT4 NDUFB10P1-201ENST00000567319 521 ntBASIC15.88■□□□□ 0.13
TRIM50Q86XT4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 RN7SL665P-201ENST00000578793 300 ntBASIC15.88■□□□□ 0.13
TRIM50Q86XT4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 CICP4-201ENST00000447359 2812 ntBASIC15.88■□□□□ 0.13
TRIM50Q86XT4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 TEKT4P2-202ENST00000559466 1312 ntBASIC15.88■□□□□ 0.13
TRIM50Q86XT4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM50Q86XT4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms