Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 NDUFV2P1-201ENST00000596415 907 ntBASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 TUBBP5-203ENST00000508529 1334 ntBASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
LYSMD3Q7Z3D4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 PPT1-213ENST00000641319 2388 ntBASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 TSPY25P-201ENST00000429463 745 ntBASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 NAP1L6-202ENST00000641404 1222 ntBASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 LINC02486-201ENST00000604157 3000 ntBASIC14.39□□□□□ -0.11
LYSMD3Q7Z3D4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 AC091544.8-201ENST00000619490 361 ntBASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD3Q7Z3D4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms