Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.48□□□□□ -0.25
LPCAT4Q643R3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 RN7SL618P-201ENST00000477850 296 ntBASIC13.48□□□□□ -0.25
LPCAT4Q643R3 SDHAP3-202ENST00000515467 728 ntBASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 MIR6080-201ENST00000617359 66 ntBASIC13.48□□□□□ -0.25
LPCAT4Q643R3 BX539320.1-201ENST00000623759 877 ntBASIC13.48□□□□□ -0.25
LPCAT4Q643R3 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 MCU-204ENST00000536019 3224 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 SALL4P6-201ENST00000429385 1691 ntBASIC13.47□□□□□ -0.25
LPCAT4Q643R3 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 HTR5BP-201ENST00000430851 1154 ntBASIC13.47□□□□□ -0.25
LPCAT4Q643R3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 AC093520.2-201ENST00000561830 333 ntBASIC13.47□□□□□ -0.25
LPCAT4Q643R3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 AC005586.2-201ENST00000563946 837 ntBASIC13.47□□□□□ -0.25
LPCAT4Q643R3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LPCAT4Q643R3 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 STRCP1-201ENST00000509801 5328 ntBASIC13.46□□□□□ -0.25
LPCAT4Q643R3 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms