Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 AC015818.3-201ENST00000583797 589 ntBASIC13.58□□□□□ -0.24
RIF1Q5UIP0 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.58□□□□□ -0.24
RIF1Q5UIP0 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 Z98885.3-201ENST00000624882 1757 ntBASIC13.58□□□□□ -0.24
RIF1Q5UIP0 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 PHBP3-201ENST00000412562 819 ntBASIC13.57□□□□□ -0.24
RIF1Q5UIP0 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 PRDX2P3-201ENST00000515779 586 ntBASIC13.57□□□□□ -0.24
RIF1Q5UIP0 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 SFPQP1-201ENST00000446621 1786 ntBASIC13.57□□□□□ -0.24
RIF1Q5UIP0 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 RPL3P2-204ENST00000413027 1203 ntBASIC13.57□□□□□ -0.24
RIF1Q5UIP0 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 SRPK2P-201ENST00000523408 1100 ntBASIC13.57□□□□□ -0.24
RIF1Q5UIP0 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RIF1Q5UIP0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.56□□□□□ -0.24
RIF1Q5UIP0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.56□□□□□ -0.24
RIF1Q5UIP0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
RIF1Q5UIP0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms