Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01559Q495D7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AL023775.1-201ENST00000454907 1746 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 VN1R108P-201ENST00000431580 830 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 FDX1P1-201ENST00000449115 551 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC023141.5-201ENST00000458585 616 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 HNRNPA1P56-201ENST00000505767 954 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC109464.1-201ENST00000511091 819 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 HNRNPA1P12-201ENST00000515379 961 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC093510.2-201ENST00000562820 896 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC010336.2-201ENST00000564226 506 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC098935.2-201ENST00000604222 466 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 AL133507.1-201ENST00000605269 557 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 PPATP2-201ENST00000605635 508 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC004808.2-201ENST00000627965 773 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC006927.2-201ENST00000639256 389 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 AL109936.8-201ENST00000641772 604 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC009061.2-203ENST00000635000 1462 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 LINC01343-201ENST00000431311 2283 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 AC131212.3-201ENST00000624087 4219 ntBASIC11.1□□□□□ -0.63
LINC01559Q495D7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01559Q495D7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
LINC01559Q495D7 TUBB3P1-201ENST00000405796 1332 ntBASIC11.09□□□□□ -0.63
LINC01559Q495D7 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
LINC01559Q495D7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01559Q495D7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01559Q495D7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01559Q495D7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms