RNA–Protein interactions for RNA: ENST00000431311.1

LINC01343-201, Transcript of long intergenic non-protein coding RNA 1343, humanhuman

TSL 3 BASIC

Gene LINC01343, Length 2,283 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01343-201ENST00000431311 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
LINC01343-201ENST00000431311 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
LINC01343-201ENST00000431311 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
LINC01343-201ENST00000431311 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
LINC01343-201ENST00000431311 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
LINC01343-201ENST00000431311 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
LINC01343-201ENST00000431311 ADRA2BP18089 450 aa20.09■□□□□ 0.81
LINC01343-201ENST00000431311 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
LINC01343-201ENST00000431311 FOXD1Q16676 465 aa19.88■□□□□ 0.77
LINC01343-201ENST00000431311 KCNA4P22459 653 aa19.59■□□□□ 0.73
LINC01343-201ENST00000431311 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
LINC01343-201ENST00000431311 PIAS4Q8N2W9 510 aaPredicted RBP18.94■□□□□ 0.62
LINC01343-201ENST00000431311 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
LINC01343-201ENST00000431311 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
LINC01343-201ENST00000431311 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
LINC01343-201ENST00000431311 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
LINC01343-201ENST00000431311 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
LINC01343-201ENST00000431311 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
LINC01343-201ENST00000431311 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
LINC01343-201ENST00000431311 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
LINC01343-201ENST00000431311 ZBTB22O15209 634 aa18.1■□□□□ 0.49
LINC01343-201ENST00000431311 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
LINC01343-201ENST00000431311 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
LINC01343-201ENST00000431311 MSH5O43196 834 aa17.86■□□□□ 0.45
LINC01343-201ENST00000431311 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
LINC01343-201ENST00000431311 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.44
LINC01343-201ENST00000431311 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.44
LINC01343-201ENST00000431311 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
LINC01343-201ENST00000431311 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
LINC01343-201ENST00000431311 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
LINC01343-201ENST00000431311 HRCP23327 699 aa17.62■□□□□ 0.41
LINC01343-201ENST00000431311 ABCC9O60706 1549 aa17.6■□□□□ 0.41
LINC01343-201ENST00000431311 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
LINC01343-201ENST00000431311 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
LINC01343-201ENST00000431311 NACADO15069 1562 aa17.32■□□□□ 0.36
LINC01343-201ENST00000431311 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
LINC01343-201ENST00000431311 HOXD11P31277 338 aaPredicted RBP17.29■□□□□ 0.36
LINC01343-201ENST00000431311 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
LINC01343-201ENST00000431311 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
LINC01343-201ENST00000431311 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
LINC01343-201ENST00000431311 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
LINC01343-201ENST00000431311 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
LINC01343-201ENST00000431311 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
LINC01343-201ENST00000431311 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.31
LINC01343-201ENST00000431311 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
LINC01343-201ENST00000431311 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
LINC01343-201ENST00000431311 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
LINC01343-201ENST00000431311 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
LINC01343-201ENST00000431311 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
LINC01343-201ENST00000431311 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.28
LINC01343-201ENST00000431311 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
LINC01343-201ENST00000431311 FKBP8Q14318 412 aa16.8■□□□□ 0.28
LINC01343-201ENST00000431311 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
LINC01343-201ENST00000431311 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
LINC01343-201ENST00000431311 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
LINC01343-201ENST00000431311 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
LINC01343-201ENST00000431311 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
LINC01343-201ENST00000431311 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
LINC01343-201ENST00000431311 WIZO95785 1651 aa16.63■□□□□ 0.25
LINC01343-201ENST00000431311 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC01343-201ENST00000431311 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
LINC01343-201ENST00000431311 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
LINC01343-201ENST00000431311 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
LINC01343-201ENST00000431311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC01343-201ENST00000431311 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
LINC01343-201ENST00000431311 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
LINC01343-201ENST00000431311 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
LINC01343-201ENST00000431311 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
LINC01343-201ENST00000431311 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
LINC01343-201ENST00000431311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
LINC01343-201ENST00000431311 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
LINC01343-201ENST00000431311 FAM9AQ8IZU1 332 aaPredicted RBP16.31■□□□□ 0.2
LINC01343-201ENST00000431311 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
LINC01343-201ENST00000431311 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
LINC01343-201ENST00000431311 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
LINC01343-201ENST00000431311 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
LINC01343-201ENST00000431311 ACIN1Q9UKV3 1341 aaKnown RBP16.2■□□□□ 0.18
LINC01343-201ENST00000431311 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
LINC01343-201ENST00000431311 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
LINC01343-201ENST00000431311 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
LINC01343-201ENST00000431311 CCER1Q8TC90 406 aaPredicted RBP16.1■□□□□ 0.17
LINC01343-201ENST00000431311 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
LINC01343-201ENST00000431311 MYT1Q01538 1121 aa16.06■□□□□ 0.16
LINC01343-201ENST00000431311 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
LINC01343-201ENST00000431311 DIEXFQ68CQ4 756 aaKnown RBP16.03■□□□□ 0.16
LINC01343-201ENST00000431311 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
LINC01343-201ENST00000431311 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
LINC01343-201ENST00000431311 GTF3C3Q9Y5Q9 886 aa16■□□□□ 0.15
LINC01343-201ENST00000431311 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
LINC01343-201ENST00000431311 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
LINC01343-201ENST00000431311 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
LINC01343-201ENST00000431311 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
LINC01343-201ENST00000431311 APLP2Q06481 763 aa15.88■□□□□ 0.13
LINC01343-201ENST00000431311 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
LINC01343-201ENST00000431311 SOGA1O94964 1423 aa15.85■□□□□ 0.13
LINC01343-201ENST00000431311 FBXO3Q9UK99 471 aa15.84■□□□□ 0.13
LINC01343-201ENST00000431311 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
LINC01343-201ENST00000431311 TNIKQ9UKE5 1360 aa15.82■□□□□ 0.12
LINC01343-201ENST00000431311 ZNF316A6NFI3 1004 aaPredicted RBP15.82■□□□□ 0.12
LINC01343-201ENST00000431311 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms