RNA–Protein interactions for RNA: ENST00000445464.1

AP000688.3-201, humanhuman

TSL 3 BASIC

Gene AP000688.3, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000688.3-201ENST00000445464 AEBP2Q6ZN18 517 aaPredicted RBP31.25■■■□□ 2.59
AP000688.3-201ENST00000445464 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
AP000688.3-201ENST00000445464 SENP3Q9H4L4 574 aaPredicted RBP26.77■■□□□ 1.88
AP000688.3-201ENST00000445464 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
AP000688.3-201ENST00000445464 FOXD1Q16676 465 aa24.86■■□□□ 1.57
AP000688.3-201ENST00000445464 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
AP000688.3-201ENST00000445464 MSH5O43196 834 aa23.35■■□□□ 1.33
AP000688.3-201ENST00000445464 PIAS4Q8N2W9 510 aaPredicted RBP23.29■■□□□ 1.32
AP000688.3-201ENST00000445464 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
AP000688.3-201ENST00000445464 ADRA2BP18089 450 aa23.18■■□□□ 1.3
AP000688.3-201ENST00000445464 POTEDQ86YR6 584 aa22.62■■□□□ 1.21
AP000688.3-201ENST00000445464 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
AP000688.3-201ENST00000445464 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
AP000688.3-201ENST00000445464 MAPK8IP2Q13387 824 aaPredicted RBP21.25■□□□□ 0.99
AP000688.3-201ENST00000445464 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
AP000688.3-201ENST00000445464 PPP4R3CPQ6ZMV5 832 aa20.88■□□□□ 0.93
AP000688.3-201ENST00000445464 CNKSR2Q8WXI2 1034 aa20.52■□□□□ 0.88
AP000688.3-201ENST00000445464 HOXD11P31277 338 aaPredicted RBP20.45■□□□□ 0.86
AP000688.3-201ENST00000445464 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
AP000688.3-201ENST00000445464 DCAF8L1A6NGE4 600 aa20.32■□□□□ 0.84
AP000688.3-201ENST00000445464 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
AP000688.3-201ENST00000445464 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
AP000688.3-201ENST00000445464 CACNB1Q02641 598 aaPredicted RBP19.96■□□□□ 0.79
AP000688.3-201ENST00000445464 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
AP000688.3-201ENST00000445464 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
AP000688.3-201ENST00000445464 NPM3O75607 178 aaKnown RBP19.79■□□□□ 0.76
AP000688.3-201ENST00000445464 ABCC9O60706 1549 aa19.77■□□□□ 0.76
AP000688.3-201ENST00000445464 C1QBPQ07021 282 aaKnown RBP19.64■□□□□ 0.73
AP000688.3-201ENST00000445464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
AP000688.3-201ENST00000445464 KCNA4P22459 653 aa19.44■□□□□ 0.7
AP000688.3-201ENST00000445464 U3KPZ7 1027 aaPredicted RBP19.05■□□□□ 0.64
AP000688.3-201ENST00000445464 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
AP000688.3-201ENST00000445464 SLC4A2P04920 1241 aa18.87■□□□□ 0.61
AP000688.3-201ENST00000445464 NACADO15069 1562 aa18.85■□□□□ 0.61
AP000688.3-201ENST00000445464 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
AP000688.3-201ENST00000445464 CAPN15O75808 1086 aa18.75■□□□□ 0.59
AP000688.3-201ENST00000445464 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
AP000688.3-201ENST00000445464 APLP2Q06481 763 aa18.67■□□□□ 0.58
AP000688.3-201ENST00000445464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
AP000688.3-201ENST00000445464 HNRNPUL2Q1KMD3 747 aaKnown RBP18.64■□□□□ 0.57
AP000688.3-201ENST00000445464 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
AP000688.3-201ENST00000445464 DSG3P32926 999 aa18.62■□□□□ 0.57
AP000688.3-201ENST00000445464 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
AP000688.3-201ENST00000445464 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
AP000688.3-201ENST00000445464 SAMD1Q6SPF0 538 aaPredicted RBP18.51■□□□□ 0.55
AP000688.3-201ENST00000445464 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
AP000688.3-201ENST00000445464 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
AP000688.3-201ENST00000445464 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
AP000688.3-201ENST00000445464 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
AP000688.3-201ENST00000445464 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
AP000688.3-201ENST00000445464 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
AP000688.3-201ENST00000445464 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
AP000688.3-201ENST00000445464 ABCB7O75027 752 aa18.28■□□□□ 0.52
AP000688.3-201ENST00000445464 SCRIBQ14160 1630 aa18.21■□□□□ 0.51
AP000688.3-201ENST00000445464 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
AP000688.3-201ENST00000445464 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
AP000688.3-201ENST00000445464 POLA2Q14181 598 aa17.96■□□□□ 0.47
AP000688.3-201ENST00000445464 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
AP000688.3-201ENST00000445464 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
AP000688.3-201ENST00000445464 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
AP000688.3-201ENST00000445464 ZBTB22O15209 634 aa17.84■□□□□ 0.45
AP000688.3-201ENST00000445464 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
AP000688.3-201ENST00000445464 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
AP000688.3-201ENST00000445464 POTEHQ6S545 545 aa17.76■□□□□ 0.43
AP000688.3-201ENST00000445464 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
AP000688.3-201ENST00000445464 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
AP000688.3-201ENST00000445464 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
AP000688.3-201ENST00000445464 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
AP000688.3-201ENST00000445464 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
AP000688.3-201ENST00000445464 CHRDL2Q6WN34 429 aa17.38■□□□□ 0.37
AP000688.3-201ENST00000445464 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
AP000688.3-201ENST00000445464 ATAD2BQ9ULI0 1458 aa17.35■□□□□ 0.37
AP000688.3-201ENST00000445464 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
AP000688.3-201ENST00000445464 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
AP000688.3-201ENST00000445464 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
AP000688.3-201ENST00000445464 FBLN2P98095 1184 aa17.26■□□□□ 0.35
AP000688.3-201ENST00000445464 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
AP000688.3-201ENST00000445464 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
AP000688.3-201ENST00000445464 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
AP000688.3-201ENST00000445464 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
AP000688.3-201ENST00000445464 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
AP000688.3-201ENST00000445464 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
AP000688.3-201ENST00000445464 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
AP000688.3-201ENST00000445464 ERCC6Q03468 1493 aa17.09■□□□□ 0.33
AP000688.3-201ENST00000445464 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
AP000688.3-201ENST00000445464 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
AP000688.3-201ENST00000445464 WIZO95785 1651 aa17.04■□□□□ 0.32
AP000688.3-201ENST00000445464 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
AP000688.3-201ENST00000445464 NESP48681 1621 aa17.02■□□□□ 0.31
AP000688.3-201ENST00000445464 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
AP000688.3-201ENST00000445464 CUX2O14529 1486 aa16.97■□□□□ 0.31
AP000688.3-201ENST00000445464 PIP4P2Q8N4L2 257 aa16.95■□□□□ 0.3
AP000688.3-201ENST00000445464 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
AP000688.3-201ENST00000445464 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
AP000688.3-201ENST00000445464 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
AP000688.3-201ENST00000445464 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
AP000688.3-201ENST00000445464 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
AP000688.3-201ENST00000445464 SSUH2Q9Y2M2 353 aa16.87■□□□□ 0.29
AP000688.3-201ENST00000445464 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
AP000688.3-201ENST00000445464 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms