Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 HMGA1P1-201ENST00000415560 1062 ntBASIC14.18□□□□□ -0.14
CCDC153Q494R4 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 ST13P19-201ENST00000442505 1124 ntBASIC14.18□□□□□ -0.14
CCDC153Q494R4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 AL590640.2-201ENST00000457038 527 ntBASIC14.18□□□□□ -0.14
CCDC153Q494R4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 AC073413.1-201ENST00000603927 732 ntBASIC14.18□□□□□ -0.14
CCDC153Q494R4 AC006453.4-201ENST00000636949 1252 ntBASIC14.18□□□□□ -0.14
CCDC153Q494R4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 SHC1P1-201ENST00000425230 1745 ntBASIC14.18□□□□□ -0.14
CCDC153Q494R4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC153Q494R4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC153Q494R4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 AC083964.2-201ENST00000623988 2396 ntBASIC14.17□□□□□ -0.14
CCDC153Q494R4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 AL354989.2-201ENST00000435838 1540 ntBASIC14.17□□□□□ -0.14
CCDC153Q494R4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 ZACNP1-201ENST00000612259 710 ntBASIC14.17□□□□□ -0.14
CCDC153Q494R4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 BEND3P3-201ENST00000611030 2440 ntBASIC14.17□□□□□ -0.14
CCDC153Q494R4 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 AC019294.4-201ENST00000561777 2905 ntBASIC14.17□□□□□ -0.14
CCDC153Q494R4 AP002761.4-201ENST00000565433 3361 ntBASIC14.17□□□□□ -0.14
CCDC153Q494R4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC153Q494R4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC153Q494R4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 AL590824.1-201ENST00000403828 1349 ntBASIC14.16□□□□□ -0.14
CCDC153Q494R4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC153Q494R4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC153Q494R4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC153Q494R4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC153Q494R4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms