Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC093300.1-201ENST00000510368 1201 ntBASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 RN7SL300P-201ENST00000582522 318 ntBASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 AC010531.8-201ENST00000623341 685 ntBASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 TNRC18P2-201ENST00000417666 2714 ntBASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.69□□□□□ -0.22
RSPO4Q2I0M5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 OR4C14P-201ENST00000440929 923 ntBASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 AP003040.1-201ENST00000532044 1024 ntBASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CDC37P2-201ENST00000562287 1029 ntBASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 AC126755.5-201ENST00000622756 267 ntBASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 NORAD-201ENST00000565493 5339 ntBASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RSPO4Q2I0M5 AL121753.2-201ENST00000624581 1461 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms