Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
GABREP78334 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GABREP78334 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GABREP78334 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GABREP78334 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.55□□□□□ -0.24
GABREP78334 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.55□□□□□ -0.24
GABREP78334 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
GABREP78334 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
GABREP78334 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GABREP78334 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
GABREP78334 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GABREP78334 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 AC106881.1-201ENST00000605849 3329 ntBASIC13.54□□□□□ -0.24
GABREP78334 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.54□□□□□ -0.24
GABREP78334 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
GABREP78334 RNVU1-8-201ENST00000364272 125 ntBASIC13.54□□□□□ -0.24
GABREP78334 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.54□□□□□ -0.24
GABREP78334 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
GABREP78334 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.54□□□□□ -0.24
GABREP78334 AC006987.1-201ENST00000413610 527 ntBASIC13.54□□□□□ -0.24
GABREP78334 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.54□□□□□ -0.24
GABREP78334 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.54□□□□□ -0.24
GABREP78334 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.54□□□□□ -0.24
GABREP78334 AC063952.3-201ENST00000467756 308 ntBASIC13.54□□□□□ -0.24
GABREP78334 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.54□□□□□ -0.24
GABREP78334 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.54□□□□□ -0.24
GABREP78334 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.54□□□□□ -0.24
GABREP78334 KRT8P2-201ENST00000556193 944 ntBASIC13.54□□□□□ -0.24
GABREP78334 NDUFB10P1-201ENST00000567319 521 ntBASIC13.54□□□□□ -0.24
GABREP78334 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.54□□□□□ -0.24
GABREP78334 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.54□□□□□ -0.24
GABREP78334 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
GABREP78334 AC006548.2-201ENST00000605217 529 ntBASIC13.54□□□□□ -0.24
GABREP78334 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.54□□□□□ -0.24
GABREP78334 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GABREP78334 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
GABREP78334 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABREP78334 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.53□□□□□ -0.24
GABREP78334 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.53□□□□□ -0.24
GABREP78334 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GABREP78334 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GABREP78334 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GABREP78334 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GABREP78334 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GABREP78334 MIR1301-201ENST00000408518 82 ntBASIC13.53□□□□□ -0.24
GABREP78334 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.53□□□□□ -0.24
GABREP78334 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 GRPEL2P1-201ENST00000453145 339 ntBASIC13.53□□□□□ -0.24
GABREP78334 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 AC093826.1-201ENST00000508655 993 ntBASIC13.53□□□□□ -0.24
GABREP78334 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 VENTXP3-201ENST00000546480 773 ntBASIC13.53□□□□□ -0.24
GABREP78334 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.53□□□□□ -0.24
GABREP78334 TRMT112P3-201ENST00000580149 358 ntBASIC13.53□□□□□ -0.24
GABREP78334 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 AC008972.2-201ENST00000606587 494 ntBASIC13.53□□□□□ -0.24
GABREP78334 AL139339.2-201ENST00000608063 657 ntBASIC13.53□□□□□ -0.24
GABREP78334 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.53□□□□□ -0.24
GABREP78334 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.53□□□□□ -0.24
GABREP78334 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
GABREP78334 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms