Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 SDCCAG3P2-201ENST00000326105 1023 ntBASIC10.64□□□□□ -0.71
CMC4P56277 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 RNA5SP359-201ENST00000364838 113 ntBASIC10.64□□□□□ -0.71
CMC4P56277 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC10.64□□□□□ -0.71
CMC4P56277 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 BANF1P3-201ENST00000412556 261 ntBASIC10.64□□□□□ -0.71
CMC4P56277 CYP46A4P-201ENST00000414953 267 ntBASIC10.64□□□□□ -0.71
CMC4P56277 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 DEF8-202ENST00000418391 852 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 AL592076.1-201ENST00000424448 303 ntBASIC10.64□□□□□ -0.71
CMC4P56277 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC10.64□□□□□ -0.71
CMC4P56277 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.64□□□□□ -0.71
CMC4P56277 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 REEP1-202ENST00000453231 940 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC10.64□□□□□ -0.71
CMC4P56277 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.64□□□□□ -0.71
CMC4P56277 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.64□□□□□ -0.71
CMC4P56277 MIR3619-201ENST00000579667 83 ntBASIC10.64□□□□□ -0.71
CMC4P56277 NAT9-220ENST00000582870 896 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 AL022334.2-201ENST00000610000 484 ntBASIC10.64□□□□□ -0.71
CMC4P56277 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
CMC4P56277 GPR182-203ENST00000622922 591 ntBASIC10.64□□□□□ -0.71
CMC4P56277 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.64□□□□□ -0.71
CMC4P56277 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 AMT-256ENST00000638063 1783 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 LINC02228-204ENST00000642115 2962 ntBASIC10.64□□□□□ -0.71
CMC4P56277 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 AL359881.3-201ENST00000602640 1721 ntBASIC10.64□□□□□ -0.71
CMC4P56277 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 FAM90A2P-201ENST00000511144 1395 ntBASIC10.64□□□□□ -0.71
CMC4P56277 FAM90A25P-201ENST00000528404 1395 ntBASIC10.64□□□□□ -0.71
CMC4P56277 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 AP001267.2-201ENST00000532619 2086 ntBASIC10.63□□□□□ -0.71
CMC4P56277 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CMC4P56277 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 BX679664.3-201ENST00000414070 555 ntBASIC10.63□□□□□ -0.71
CMC4P56277 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 ISCA2P1-201ENST00000425548 448 ntBASIC10.63□□□□□ -0.71
CMC4P56277 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 AC026320.2-201ENST00000434379 478 ntBASIC10.63□□□□□ -0.71
CMC4P56277 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 AK2P2-201ENST00000439142 405 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms