Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LCN1P31025 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.3□□□□□ -0.28
LCN1P31025 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LCN1P31025 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.3□□□□□ -0.28
LCN1P31025 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 CYP4F23P-201ENST00000593402 1579 ntBASIC13.29□□□□□ -0.28
LCN1P31025 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 AC011474.4-201ENST00000623523 2076 ntBASIC13.29□□□□□ -0.28
LCN1P31025 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LCN1P31025 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 AC078875.1-201ENST00000431907 724 ntBASIC13.29□□□□□ -0.28
LCN1P31025 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 AC005730.2-201ENST00000564549 1184 ntBASIC13.29□□□□□ -0.28
LCN1P31025 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 AC091271.1-201ENST00000611877 1162 ntBASIC13.29□□□□□ -0.28
LCN1P31025 AC005695.3-201ENST00000614522 232 ntBASIC13.29□□□□□ -0.28
LCN1P31025 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.29□□□□□ -0.28
LCN1P31025 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 AC068587.8-201ENST00000641239 219 ntBASIC13.29□□□□□ -0.28
LCN1P31025 AC004899.1-201ENST00000424687 1714 ntBASIC13.29□□□□□ -0.28
LCN1P31025 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.29□□□□□ -0.28
LCN1P31025 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.29□□□□□ -0.28
LCN1P31025 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LCN1P31025 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LCN1P31025 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LCN1P31025 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
LCN1P31025 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.28□□□□□ -0.28
LCN1P31025 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.28□□□□□ -0.28
LCN1P31025 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LCN1P31025 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LCN1P31025 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LCN1P31025 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.28□□□□□ -0.28
LCN1P31025 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.28□□□□□ -0.28
LCN1P31025 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.28□□□□□ -0.28
LCN1P31025 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.28□□□□□ -0.28
LCN1P31025 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LCN1P31025 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LCN1P31025 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LCN1P31025 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.28□□□□□ -0.28
LCN1P31025 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LCN1P31025 SCARNA21-201ENST00000517026 139 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms