Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH3P22223 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDH3P22223 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH3P22223 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH3P22223 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH3P22223 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 AC083964.2-201ENST00000623988 2396 ntBASIC14.12□□□□□ -0.15
CDH3P22223 AL591122.2-201ENST00000624125 1853 ntBASIC14.12□□□□□ -0.15
CDH3P22223 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH3P22223 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDH3P22223 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
CDH3P22223 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CDH3P22223 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH3P22223 MIR769-201ENST00000390225 118 ntBASIC14.12□□□□□ -0.15
CDH3P22223 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CDH3P22223 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.12□□□□□ -0.15
CDH3P22223 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH3P22223 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH3P22223 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH3P22223 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH3P22223 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH3P22223 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CDH3P22223 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH3P22223 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CDH3P22223 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH3P22223 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH3P22223 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH3P22223 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH3P22223 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH3P22223 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 AC139712.1-201ENST00000378256 1875 ntBASIC14.11□□□□□ -0.15
CDH3P22223 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH3P22223 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 AL008707.1-201ENST00000422498 534 ntBASIC14.11□□□□□ -0.15
CDH3P22223 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH3P22223 AC022217.1-201ENST00000521069 738 ntBASIC14.11□□□□□ -0.15
CDH3P22223 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH3P22223 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH3P22223 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH3P22223 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH3P22223 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDH3P22223 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH3P22223 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.11□□□□□ -0.15
CDH3P22223 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH3P22223 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH3P22223 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 AC015909.5-201ENST00000624336 2266 ntBASIC14.11□□□□□ -0.15
CDH3P22223 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH3P22223 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms