Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.7■□□□□ 0.1
ITGA4P13612 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITGA4P13612 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ITGA4P13612 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ITGA4P13612 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITGA4P13612 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.7■□□□□ 0.1
ITGA4P13612 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.7■□□□□ 0.1
ITGA4P13612 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ITGA4P13612 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ITGA4P13612 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITGA4P13612 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
ITGA4P13612 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 OR2I1P-209ENST00000641730 5365 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 AC090505.1-201ENST00000430515 1834 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 AC026316.1-201ENST00000398900 414 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.69■□□□□ 0.1
ITGA4P13612 AL592076.1-201ENST00000424448 303 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.69■□□□□ 0.1
ITGA4P13612 RPSAP15-201ENST00000448168 861 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 AP000358.1-201ENST00000456260 156 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.69■□□□□ 0.1
ITGA4P13612 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 SORD2P-201ENST00000558556 1069 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.69■□□□□ 0.1
ITGA4P13612 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.69■□□□□ 0.1
ITGA4P13612 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.69■□□□□ 0.1
ITGA4P13612 AC021016.3-201ENST00000608367 477 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 AL022334.2-201ENST00000610000 484 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.69■□□□□ 0.1
ITGA4P13612 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.69■□□□□ 0.1
ITGA4P13612 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.69■□□□□ 0.1
ITGA4P13612 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
ITGA4P13612 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.69■□□□□ 0.1
ITGA4P13612 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ITGA4P13612 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
ITGA4P13612 AL137784.3-201ENST00000623858 2288 ntBASIC15.69■□□□□ 0.1
ITGA4P13612 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ITGA4P13612 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.68■□□□□ 0.1
ITGA4P13612 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.68■□□□□ 0.1
ITGA4P13612 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.68■□□□□ 0.1
ITGA4P13612 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.68■□□□□ 0.1
ITGA4P13612 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 AP002353.1-201ENST00000528257 1599 ntBASIC15.68■□□□□ 0.1
ITGA4P13612 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 AL583805.1-201ENST00000391389 531 ntBASIC15.68■□□□□ 0.1
ITGA4P13612 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms