Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
THBS1P07996 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.2□□□□□ -0.3
THBS1P07996 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
THBS1P07996 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.2□□□□□ -0.3
THBS1P07996 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 AC105206.1-202ENST00000314927 2368 ntBASIC13.2□□□□□ -0.3
THBS1P07996 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.2□□□□□ -0.3
THBS1P07996 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.2□□□□□ -0.3
THBS1P07996 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 MARK2P9-201ENST00000430958 1727 ntBASIC13.19□□□□□ -0.3
THBS1P07996 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 AC126335.2-201ENST00000623362 4637 ntBASIC13.19□□□□□ -0.3
THBS1P07996 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.19□□□□□ -0.3
THBS1P07996 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 OR2R1P-201ENST00000441404 914 ntBASIC13.19□□□□□ -0.3
THBS1P07996 HSPB1P2-201ENST00000448722 546 ntBASIC13.19□□□□□ -0.3
THBS1P07996 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.19□□□□□ -0.3
THBS1P07996 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.19□□□□□ -0.3
THBS1P07996 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.19□□□□□ -0.3
THBS1P07996 AC121493.1-201ENST00000602316 450 ntBASIC13.19□□□□□ -0.3
THBS1P07996 AL023803.2-201ENST00000620080 638 ntBASIC13.19□□□□□ -0.3
THBS1P07996 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 CR392039.2-201ENST00000623182 509 ntBASIC13.19□□□□□ -0.3
THBS1P07996 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
THBS1P07996 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
THBS1P07996 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
THBS1P07996 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
THBS1P07996 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.18□□□□□ -0.3
THBS1P07996 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
THBS1P07996 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.18□□□□□ -0.3
THBS1P07996 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms