Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.41□□□□□ -0.1
KDELR3O43731 AL592076.1-201ENST00000424448 303 ntBASIC14.41□□□□□ -0.1
KDELR3O43731 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 FTH1P22-201ENST00000456305 520 ntBASIC14.41□□□□□ -0.1
KDELR3O43731 SLC25A15P3-201ENST00000505530 290 ntBASIC14.41□□□□□ -0.1
KDELR3O43731 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.41□□□□□ -0.1
KDELR3O43731 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.41□□□□□ -0.1
KDELR3O43731 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 AC061965.1-201ENST00000560524 1465 ntBASIC14.41□□□□□ -0.1
KDELR3O43731 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 AC011474.4-201ENST00000623523 2076 ntBASIC14.41□□□□□ -0.1
KDELR3O43731 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.41□□□□□ -0.1
KDELR3O43731 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
KDELR3O43731 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.4□□□□□ -0.1
KDELR3O43731 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
KDELR3O43731 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.4□□□□□ -0.1
KDELR3O43731 AK2P2-201ENST00000439142 405 ntBASIC14.4□□□□□ -0.1
KDELR3O43731 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.4□□□□□ -0.1
KDELR3O43731 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.4□□□□□ -0.1
KDELR3O43731 RPL18AP8-201ENST00000486071 528 ntBASIC14.4□□□□□ -0.1
KDELR3O43731 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
KDELR3O43731 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.4□□□□□ -0.1
KDELR3O43731 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
KDELR3O43731 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.4□□□□□ -0.1
KDELR3O43731 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 AL928654.5-201ENST00000624831 2501 ntBASIC14.4□□□□□ -0.1
KDELR3O43731 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KDELR3O43731 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
KDELR3O43731 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.4□□□□□ -0.11
KDELR3O43731 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KDELR3O43731 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms