Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 RN7SL832P-201ENST00000607781 1756 ntBASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 RNA5SP359-201ENST00000364838 113 ntBASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 MEG3_2.1-201ENST00000611456 105 ntBASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 AC103691.2-201ENST00000618824 433 ntBASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 FP325330.2-201ENST00000624219 5630 ntBASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 AL136379.1-201ENST00000623471 2642 ntBASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA3F8WFD2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms