Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IFT140Q96RY7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
IFT140Q96RY7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IFT140Q96RY7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IFT140Q96RY7 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IFT140Q96RY7 SERF2-205ENST00000403425 690 ntTSL 2 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IFT140Q96RY7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IFT140Q96RY7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 MKRN7P-201ENST00000433469 1371 ntBASIC22.64■■□□□ 1.21
IFT140Q96RY7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC22.64■■□□□ 1.21
IFT140Q96RY7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 AL513497.1-201ENST00000624273 2083 ntBASIC22.63■■□□□ 1.21
IFT140Q96RY7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 SERF2-204ENST00000402131 586 ntTSL 2 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 AC012066.1-201ENST00000439252 694 ntBASIC22.63■■□□□ 1.21
IFT140Q96RY7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
IFT140Q96RY7 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC22.63■■□□□ 1.21
IFT140Q96RY7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 AC067942.1-202ENST00000471756 1057 ntBASIC22.62■■□□□ 1.21
IFT140Q96RY7 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 AC090616.6-202ENST00000583601 1088 ntBASIC22.62■■□□□ 1.21
IFT140Q96RY7 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 AP000553.2-201ENST00000609038 441 ntBASIC22.62■■□□□ 1.21
IFT140Q96RY7 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 CD9-212ENST00000610354 1315 ntTSL 5 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IFT140Q96RY7 AL031587.5-201ENST00000624344 1849 ntBASIC22.62■■□□□ 1.21
IFT140Q96RY7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
IFT140Q96RY7 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 AP000343.1-201ENST00000440602 385 ntBASIC22.61■■□□□ 1.21
IFT140Q96RY7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 AC104759.1-201ENST00000559109 939 ntBASIC22.61■■□□□ 1.21
IFT140Q96RY7 MIR4539-201ENST00000579784 60 ntBASIC22.61■■□□□ 1.21
IFT140Q96RY7 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 AL356740.1-201ENST00000602192 1297 ntBASIC22.61■■□□□ 1.21
IFT140Q96RY7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 AP000437.1-201ENST00000624057 2085 ntBASIC22.61■■□□□ 1.21
IFT140Q96RY7 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IFT140Q96RY7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
IFT140Q96RY7 AC024475.2-201ENST00000312173 879 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms