Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 ERP29P1-201ENST00000442902 706 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AP003398.1-201ENST00000531124 318 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 HERC2P11-201ENST00000562845 725 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC100756.2-201ENST00000569537 736 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AL133467.4-201ENST00000602953 725 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AP001065.2-201ENST00000617205 644 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC025262.2-201ENST00000623975 1056 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 AC117489.1-201ENST00000625169 3217 ntBASIC15.48■□□□□ 0.07
PGBD4Q96DM1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.48■□□□□ 0.07
PGBD4Q96DM1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 AC005912.2-201ENST00000619492 2400 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 HIST2H2BA-201ENST00000412169 381 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 AC092638.2-201ENST00000441105 947 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 AC018638.5-201ENST00000450885 754 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 NDUFB10P1-201ENST00000567319 521 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 RN7SL470P-201ENST00000583069 259 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.47■□□□□ 0.07
PGBD4Q96DM1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PGBD4Q96DM1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PGBD4Q96DM1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms