Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCNA1P78396 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CCNA1P78396 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNA1P78396 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNA1P78396 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
CCNA1P78396 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNA1P78396 HLA-DPA2-205ENST00000433582 733 ntBASIC16.1■□□□□ 0.17
CCNA1P78396 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNA1P78396 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNA1P78396 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.1■□□□□ 0.17
CCNA1P78396 AC083801.1-201ENST00000491689 358 ntBASIC16.1■□□□□ 0.17
CCNA1P78396 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNA1P78396 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCNA1P78396 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.1■□□□□ 0.17
CCNA1P78396 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CCNA1P78396 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNA1P78396 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.09■□□□□ 0.17
CCNA1P78396 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CCNA1P78396 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCNA1P78396 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.09■□□□□ 0.17
CCNA1P78396 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 AC126177.1-201ENST00000547829 2218 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.09■□□□□ 0.17
CCNA1P78396 AC097376.2-205ENST00000610159 5334 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 RPL3P2-204ENST00000413027 1203 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 AP000244.1-201ENST00000424582 201 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 TPT1P11-201ENST00000458482 498 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.09■□□□□ 0.17
CCNA1P78396 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.09■□□□□ 0.17
CCNA1P78396 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.09■□□□□ 0.17
CCNA1P78396 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.09■□□□□ 0.17
CCNA1P78396 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.09■□□□□ 0.17
CCNA1P78396 TSPY26P-202ENST00000565928 3884 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.09■□□□□ 0.17
CCNA1P78396 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCNA1P78396 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 AC011498.7-201ENST00000624986 2027 ntBASIC16.09■□□□□ 0.17
CCNA1P78396 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNA1P78396 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCNA1P78396 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.08■□□□□ 0.17
CCNA1P78396 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.08■□□□□ 0.17
CCNA1P78396 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCNA1P78396 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
CCNA1P78396 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CCNA1P78396 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCNA1P78396 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCNA1P78396 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.08■□□□□ 0.17
CCNA1P78396 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CCNA1P78396 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CCNA1P78396 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNA1P78396 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNA1P78396 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.08■□□□□ 0.16
CCNA1P78396 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.08■□□□□ 0.16
CCNA1P78396 AL512599.1-201ENST00000430724 685 ntBASIC16.08■□□□□ 0.16
CCNA1P78396 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNA1P78396 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNA1P78396 AL451000.1-201ENST00000451300 1186 ntBASIC16.08■□□□□ 0.16
CCNA1P78396 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNA1P78396 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNA1P78396 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms