Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 AC018735.1-201ENST00000437208 1502 ntBASIC15.12■□□□□ 0.01
RFC1P35251 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RFC1P35251 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 OR2R1P-201ENST00000441404 914 ntBASIC15.11■□□□□ 0.01
RFC1P35251 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.11■□□□□ 0.01
RFC1P35251 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.11■□□□□ 0.01
RFC1P35251 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.11■□□□□ 0.01
RFC1P35251 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.11■□□□□ 0.01
RFC1P35251 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.11■□□□□ 0.01
RFC1P35251 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 AP000346.4-201ENST00000614827 381 ntBASIC15.11■□□□□ 0.01
RFC1P35251 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.11■□□□□ 0.01
RFC1P35251 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.11■□□□□ 0.01
RFC1P35251 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 CCT8L1P-201ENST00000465400 1674 ntBASIC15.11■□□□□ 0.01
RFC1P35251 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.11■□□□□ 0.01
RFC1P35251 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RFC1P35251 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFC1P35251 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 AC018629.1-201ENST00000623381 1736 ntBASIC15.1■□□□□ 0.01
RFC1P35251 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RFC1P35251 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.1■□□□□ 0.01
RFC1P35251 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 POM121L10P-201ENST00000436994 1285 ntBASIC15.1■□□□□ 0.01
RFC1P35251 RPS2P32-201ENST00000439199 892 ntBASIC15.1■□□□□ 0.01
RFC1P35251 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 AC007663.3-201ENST00000609632 465 ntBASIC15.1■□□□□ 0.01
RFC1P35251 BAP1-211ENST00000615113 489 ntBASIC15.1■□□□□ 0.01
RFC1P35251 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.1■□□□□ 0.01
RFC1P35251 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.1■□□□□ 0.01
RFC1P35251 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RFC1P35251 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RFC1P35251 AC130686.1-201ENST00000622936 2466 ntBASIC15.1■□□□□ 0.01
RFC1P35251 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RFC1P35251 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC15.1■□□□□ 0.01
RFC1P35251 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.1■□□□□ 0.01
RFC1P35251 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFC1P35251 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms