Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL1P22362 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL1P22362 AC099521.3-201ENST00000624251 2938 ntBASIC12.28□□□□□ -0.44
CCL1P22362 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL1P22362 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CCL1P22362 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCL1P22362 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL1P22362 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL1P22362 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CCL1P22362 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 ANKRD19P-201ENST00000338192 862 ntBASIC12.28□□□□□ -0.44
CCL1P22362 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL1P22362 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL1P22362 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL1P22362 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.28□□□□□ -0.44
CCL1P22362 SCARNA21-201ENST00000517026 139 ntBASIC12.28□□□□□ -0.44
CCL1P22362 KRT17P8-201ENST00000540749 863 ntBASIC12.28□□□□□ -0.44
CCL1P22362 MIR4741-201ENST00000579822 90 ntBASIC12.28□□□□□ -0.44
CCL1P22362 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL1P22362 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL1P22362 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL1P22362 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL1P22362 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL1P22362 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL1P22362 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL1P22362 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL1P22362 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CCL1P22362 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CCL1P22362 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CCL1P22362 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.27□□□□□ -0.44
CCL1P22362 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CCL1P22362 AC020917.4-201ENST00000623994 1999 ntBASIC12.27□□□□□ -0.44
CCL1P22362 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL1P22362 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CCL1P22362 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.27□□□□□ -0.44
CCL1P22362 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CCL1P22362 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 HLA-V-201ENST00000429037 534 ntBASIC12.27□□□□□ -0.45
CCL1P22362 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 HLA-J-204ENST00000495278 958 ntBASIC12.27□□□□□ -0.45
CCL1P22362 AC104989.1-201ENST00000519711 778 ntBASIC12.27□□□□□ -0.45
CCL1P22362 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.27□□□□□ -0.45
CCL1P22362 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.27□□□□□ -0.45
CCL1P22362 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.27□□□□□ -0.45
CCL1P22362 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms