Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LAMC1P11047 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LAMC1P11047 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 MARK2P9-201ENST00000430958 1727 ntBASIC19.62■□□□□ 0.73
LAMC1P11047 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC19.62■□□□□ 0.73
LAMC1P11047 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC19.62■□□□□ 0.73
LAMC1P11047 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.62■□□□□ 0.73
LAMC1P11047 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LAMC1P11047 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMC1P11047 AP000244.1-201ENST00000424582 201 ntBASIC19.62■□□□□ 0.73
LAMC1P11047 AC113347.2-201ENST00000512350 279 ntBASIC19.62■□□□□ 0.73
LAMC1P11047 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC19.62■□□□□ 0.73
LAMC1P11047 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19.62■□□□□ 0.73
LAMC1P11047 MIR8071-1-201ENST00000616769 65 ntBASIC19.62■□□□□ 0.73
LAMC1P11047 MIR8071-2-201ENST00000616772 65 ntBASIC19.62■□□□□ 0.73
LAMC1P11047 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC19.61■□□□□ 0.73
LAMC1P11047 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 OS9-207ENST00000439210 1946 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 AL391647.1-201ENST00000395664 511 ntBASIC19.61■□□□□ 0.73
LAMC1P11047 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 AC092570.1-201ENST00000414446 469 ntBASIC19.61■□□□□ 0.73
LAMC1P11047 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC19.61■□□□□ 0.73
LAMC1P11047 AC023141.7-201ENST00000430646 407 ntBASIC19.61■□□□□ 0.73
LAMC1P11047 NRADDP-201ENST00000437305 691 ntBASIC19.61■□□□□ 0.73
LAMC1P11047 GALP-202ENST00000440823 889 ntTSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMC1P11047 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC19.61■□□□□ 0.73
LAMC1P11047 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMC1P11047 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LAMC1P11047 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LAMC1P11047 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LAMC1P11047 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC19.6■□□□□ 0.73
LAMC1P11047 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.6■□□□□ 0.73
LAMC1P11047 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 HLA-DMA-202ENST00000395303 1007 ntBASIC19.6■□□□□ 0.73
LAMC1P11047 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC19.6■□□□□ 0.73
LAMC1P11047 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 VDAC1P11-201ENST00000458323 852 ntBASIC19.6■□□□□ 0.73
LAMC1P11047 AC092896.1-201ENST00000465850 380 ntBASIC19.6■□□□□ 0.73
LAMC1P11047 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC19.6■□□□□ 0.73
LAMC1P11047 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC19.6■□□□□ 0.73
LAMC1P11047 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.6■□□□□ 0.73
LAMC1P11047 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC19.6■□□□□ 0.73
LAMC1P11047 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC19.6■□□□□ 0.73
LAMC1P11047 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LAMC1P11047 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.6■□□□□ 0.73
LAMC1P11047 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMC1P11047 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC19.6■□□□□ 0.73
LAMC1P11047 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms