Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.42□□□□□ -0.1
RETP07949 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.42□□□□□ -0.1
RETP07949 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.42□□□□□ -0.1
RETP07949 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.42□□□□□ -0.1
RETP07949 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RETP07949 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.42□□□□□ -0.1
RETP07949 HMGB1P24-201ENST00000611897 328 ntBASIC14.42□□□□□ -0.1
RETP07949 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RETP07949 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.42□□□□□ -0.1
RETP07949 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.42□□□□□ -0.1
RETP07949 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RETP07949 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RETP07949 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.42□□□□□ -0.1
RETP07949 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RETP07949 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RETP07949 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 LINC01230-201ENST00000625222 3017 ntBASIC14.41□□□□□ -0.1
RETP07949 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.41□□□□□ -0.1
RETP07949 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.41□□□□□ -0.1
RETP07949 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 AC152010.1-201ENST00000415779 2006 ntBASIC14.41□□□□□ -0.1
RETP07949 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RETP07949 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.41□□□□□ -0.1
RETP07949 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.41□□□□□ -0.1
RETP07949 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 RN7SKP109-201ENST00000410592 316 ntBASIC14.41□□□□□ -0.1
RETP07949 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.41□□□□□ -0.1
RETP07949 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.41□□□□□ -0.1
RETP07949 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.41□□□□□ -0.1
RETP07949 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 AL022334.2-201ENST00000610000 484 ntBASIC14.41□□□□□ -0.1
RETP07949 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RETP07949 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.41□□□□□ -0.1
RETP07949 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.41□□□□□ -0.1
RETP07949 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RETP07949 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.41□□□□□ -0.1
RETP07949 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.41□□□□□ -0.1
RETP07949 CTBP2P8-201ENST00000422584 1330 ntBASIC14.41□□□□□ -0.1
RETP07949 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RETP07949 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 SALL4P5-201ENST00000419001 1760 ntBASIC14.4□□□□□ -0.1
RETP07949 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RETP07949 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
RETP07949 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.4□□□□□ -0.1
RETP07949 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RETP07949 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RETP07949 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RETP07949 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.4□□□□□ -0.1
RETP07949 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.4□□□□□ -0.1
RETP07949 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.4□□□□□ -0.1
RETP07949 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 RN7SL494P-201ENST00000461517 304 ntBASIC14.4□□□□□ -0.1
RETP07949 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms