Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 AL583805.1-201ENST00000391389 531 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 BANF1P3-201ENST00000412556 261 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 RPS9P1-201ENST00000419943 583 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 AL592076.1-201ENST00000424448 303 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 AP000358.1-201ENST00000456260 156 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 AC003686.1-201ENST00000550956 1034 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 AC242376.2-201ENST00000619355 883 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 OR2I1P-209ENST00000641730 5365 ntBASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDAC6Q9UBN7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
HDAC6Q9UBN7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HDAC6Q9UBN7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.21■□□□□ 0.18
HDAC6Q9UBN7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HDAC6Q9UBN7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
HDAC6Q9UBN7 AHCYP4-201ENST00000419201 1315 ntBASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 RNA5SP359-201ENST00000364838 113 ntBASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 AL512430.1-201ENST00000392575 860 ntBASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 OR2R1P-201ENST00000441404 914 ntBASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms