Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 EIF4HP1-201ENST00000453115 687 ntBASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 AC009474.1-201ENST00000455096 1565 ntBASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 AC093752.3-201ENST00000567343 901 ntBASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 CHCHD2P2-201ENST00000503744 321 ntBASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AC005740.2-201ENST00000511085 419 ntBASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AC013355.1-201ENST00000562625 723 ntBASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AL157813.1-201ENST00000612996 587 ntBASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 SALL4P6-201ENST00000429385 1691 ntBASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 AC025183.3-201ENST00000623526 1482 ntBASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM5Q96HC4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 COL6A4P2-202ENST00000504443 2753 ntBASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 PPT1-213ENST00000641319 2388 ntBASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 SNORA50C-201ENST00000408535 133 ntBASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.92□□□□□ -0.18
PDLIM5Q96HC4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms